diff --git a/kernel/model/transaction.go b/kernel/model/transaction.go
index cd4c889d4..a0277cb69 100644
--- a/kernel/model/transaction.go
+++ b/kernel/model/transaction.go
@@ -1743,7 +1743,6 @@ func upsertAvBlockRel(node *ast.Node) {
 
 	go func() {
 		time.Sleep(100 * time.Millisecond)
-		sql.FlushQueue()
 
 		affectedAvIDs = gulu.Str.RemoveDuplicatedElem(affectedAvIDs)
 		var relatedAvIDs []string
@@ -2090,7 +2089,7 @@ func updateRefTextRenameDoc(renamedTree *parse.Tree) {
 }
 
 func FlushUpdateRefTextRenameDocJob() {
-	sql.FlushQueue()
+	sql.WaitFlushTx()
 	flushUpdateRefTextRenameDoc()
 }
 
diff --git a/kernel/sql/queue.go b/kernel/sql/queue.go
index 613306dbc..53e6aa17d 100644
--- a/kernel/sql/queue.go
+++ b/kernel/sql/queue.go
@@ -20,6 +20,7 @@ import (
 	"database/sql"
 	"errors"
 	"fmt"
+	"math"
 	"path"
 	"runtime/debug"
 	"sync"
@@ -30,6 +31,7 @@ import (
 	"github.com/siyuan-note/eventbus"
 	"github.com/siyuan-note/logging"
 	"github.com/siyuan-note/siyuan/kernel/task"
+	"github.com/siyuan-note/siyuan/kernel/treenode"
 	"github.com/siyuan-note/siyuan/kernel/util"
 )
 
@@ -58,6 +60,32 @@ func FlushTxJob() {
 	task.AppendTask(task.DatabaseIndexCommit, FlushQueue)
 }
 
+func WaitFlushTx() {
+	var printLog bool
+	var lastPrintLog bool
+	for i := 0; isWritingDatabase(util.SQLFlushInterval + 50*time.Millisecond); i++ {
+		time.Sleep(50 * time.Millisecond)
+		if 200 < i && !printLog { // 10s 后打日志
+			logging.LogWarnf("database is writing: \n%s", logging.ShortStack())
+			printLog = true
+		}
+		if 1200 < i && !lastPrintLog { // 60s 后打日志
+			logging.LogWarnf("database is still writing")
+			lastPrintLog = true
+		}
+	}
+}
+
+func isWritingDatabase(d time.Duration) bool {
+	time.Sleep(d)
+	dbQueueLock.Lock()
+	defer dbQueueLock.Unlock()
+	if 0 < len(operationQueue) || flushingTx.Load() {
+		return true
+	}
+	return false
+}
+
 func ClearQueue() {
 	dbQueueLock.Lock()
 	defer dbQueueLock.Unlock()
@@ -82,6 +110,32 @@ func FlushQueue() {
 
 	start := time.Now()
 
+	// logging.LogInfof("flushing database queue, total operations [%d]", total)
+
+	// 如果有重命名子树的操作，则统计各路径前缀的块树数量，数量较大的话阻塞整个队列，以便尽可能合并重命名子树的操作
+	var renameSubTreeOp *dbQueueOperation
+	for _, op := range ops {
+		if "rename_sub_tree" == op.action {
+			renameSubTreeOp = op
+			break
+		}
+	}
+	if nil != renameSubTreeOp {
+		childCount := treenode.CountBlockTreesByPathPrefix(path.Dir(renameSubTreeOp.renameTree.Path))
+		if 512 < childCount {
+			scale := math.Log(float64(childCount)/512.0+1.0) / math.Log(2.0)
+			secs := 1.0 * scale
+			if secs < 1.0 {
+				secs = 1.0
+			}
+			if secs > 12.0 {
+				secs = 12.0
+			}
+			logging.LogInfof("rename sub tree [%s] with large child count [%d], sleep [%.2fs] to wait for more operations", renameSubTreeOp.renameTree.Path, childCount, secs)
+			time.Sleep(time.Duration(secs * float64(time.Second)))
+		}
+	}
+
 	context := map[string]interface{}{eventbus.CtxPushMsg: eventbus.CtxPushMsgToStatusBar}
 	if 512 < len(ops) {
 		disableCache()
diff --git a/kernel/treenode/blocktree.go b/kernel/treenode/blocktree.go
index f3ecacfa5..e0c133854 100644
--- a/kernel/treenode/blocktree.go
+++ b/kernel/treenode/blocktree.go
@@ -410,6 +410,18 @@ func RemoveBlockTreesByRootID(rootID string) {
 	}
 }
 
+func CountBlockTreesByPathPrefix(pathPrefix string) (ret int) {
+	sqlStmt := "SELECT COUNT(*) FROM blocktrees WHERE path LIKE ?"
+	err := db.QueryRow(sqlStmt, pathPrefix+"%").Scan(&ret)
+	if err != nil {
+		if errors.Is(err, sql.ErrNoRows) {
+			return 0
+		}
+		logging.LogErrorf("sql query [%s] failed: %s", sqlStmt, err)
+	}
+	return
+}
+
 func GetBlockTreesByPathPrefix(pathPrefix string) (ret []*BlockTree) {
 	sqlStmt := "SELECT * FROM blocktrees WHERE path LIKE ?"
 	rows, err := db.Query(sqlStmt, pathPrefix+"%")