🔎 feat: Add Prompt and Agent Permissions Migration Checks (#9063)

* chore: fix mock typing in packages/api tests

* chore: improve imports, type handling and method signatures for MCPServersRegistry

* chore: use enum in migration scripts

* chore: ParsedServerConfig type to enhance server configuration handling

* feat: Implement agent permissions migration check and logging

* feat: Integrate migration checks into server initialization process

* feat: Add prompt permissions migration check and logging to server initialization

* chore: move prompt formatting functions to dedicated prompts dir

api/server/services/start/migration.js

@@ -0,0 +1,45 @@
+const { logger } = require('@librechat/data-schemas');
+const {
+  logAgentMigrationWarning,
+  logPromptMigrationWarning,
+  checkAgentPermissionsMigration,
+  checkPromptPermissionsMigration,
+} = require('@librechat/api');
+const { getProjectByName } = require('~/models/Project');
+const { Agent, PromptGroup } = require('~/db/models');
+const { findRoleByIdentifier } = require('~/models');
+
+/**
+ * Check if permissions migrations are needed for shared resources
+ * This runs at the end to ensure all systems are initialized
+ */
+async function checkMigrations() {
+  try {
+    const agentMigrationResult = await checkAgentPermissionsMigration({
+      db: {
+        findRoleByIdentifier,
+        getProjectByName,
+      },
+      AgentModel: Agent,
+    });
+    logAgentMigrationWarning(agentMigrationResult);
+  } catch (error) {
+    logger.error('Failed to check agent permissions migration:', error);
+  }
+  try {
+    const promptMigrationResult = await checkPromptPermissionsMigration({
+      db: {
+        findRoleByIdentifier,
+        getProjectByName,
+      },
+      PromptGroupModel: PromptGroup,
+    });
+    logPromptMigrationWarning(promptMigrationResult);
+  } catch (error) {
+    logger.error('Failed to check prompt permissions migration:', error);
+  }
+}
+
+module.exports = {
+  checkMigrations,
+};